Apple cupcakes with cream cheese frosting

If you are looking for a simple fall baking recipe, try this recipe for apple cupcakes with cream cheese frosting. The cream cheese frosting is not too sweet and very thick and pipeable. The cupcakes are moist and flavoured with apple butter and fall spices.

apple spice cupcakes with cream cheese frosting | kitchen heals soul

Why bake with apple butter?

Apple butter adds a highly concentrated apple flavor without adding any water to a recipe. It’s a much more efficient way of adding apple without diluting flavor or messing with cake batter ratios, thus avoiding gummy textures that can come from adding fresh chopped fruit. I’ve baked with apple butter to flavor apple cakes— like in this Apple brandy loaf cake recipe; in scones—slathered inside of apple pie scones before baking, and I’ve also used it in pie filling in this gorgeous apple butter pie, which makes a great alternative to Thanksgiving pumpkin tarts and maple apple pie.
apple spice cupcakes | kitchen heals soul

Why is cream cheese frosting runny or too sweet?

Typical recipes for cream cheese frosting have you cream the butter and the cream cheese together, then add A TON of icing sugar. The reason cream cheese frosting recipes call for so much powdered sugar is because without the extra powdered sugar, cream cheese frosting tends to be runny, unstable, weep, and soupy. Why is cream cheese frosting runny and unstable? A block of cream cheese contains a lot more water than the same weight of butter. Therefore when the cream cheese is creamed with the butter, and then the icing sugar is added in, the icing sugar draws out that moisture from the cheese, yielding a soupy, runny, unstable cream cheese frosting. This is the main reason why most cream cheese frosting recipes recommend an insane amount of icing sugar. Without all the extra powdered sugar, the frosting is too soft to work with. The frosting doesn’t hold its shape when piped and it’s quite unstable. Bakers tend to overload the frosting with powdered sugar to stiffen the frosting. This leads to a cloyingly sweet cream cheese frosting that doesn’t taste very good.

apple spice cupcakes with cream cheese frosting | kitchen heals soul

How to make thick cream cheese that is stable and pipeable

How do you make a stable, thick cream cheese frosting that can be used to frost a cake or decorate cupcakes? Change the order you mix your ingredients in!

  • Step 1 for thick, stable, pipeable cream cheese frosting: Cream the butter with the icing sugar first, thereby coating all the little sugar molecules with fat (I have no proof that this really happens, but my brain thinks it works like this, so bear with me!)
  • Step 2 for thick, stable, pipeable cream cheese frosting: Once the butter and icing sugar are well mixed, THEN you add in the COLD cream cheese. The sugar is coated with fat, therefore making it more difficult to draw out the moisture from the cold cream cheese. The cream cheese remains intact, and no water leeches out.

By following this mixing order, you can make a frosting with significantly less sugar. In fact, you end up with a frosting that tastes a lot like cheesecake, not overly sweet! At this point, you should be really excited for the recipe.

brown butter | kitchen heals soul

Once you have mastered this thick, pipeable cream cheese frosting recipe, you will see that it is so thick that you can use this cream cheese frosting to make layer cakes, like this berry chocolate cake with cream cheese frosting and this cardamom cranberry layer cake with cream cheese frosting, so you know it’s good because this cream cheese frosting works great in layer cakes too without the risk of sliding layers and weeping frosting!

apple spice cupcakes with cream cheese frosting | kitchen heals soul

These mini cupcakes are flavored with apple butter and cinnamon for a truly fall flavor, and topped with a cream cheese frosting that tastes like cheesecake. Yes, I really did pipe dollops of frosting that are practically the size of the cupcakes themselves. You will understand why when you make this frosting.



Mini apple cupcakes topped with dollops of cream cheese frosting and sprinkled with spoonfuls of graham cracker crumbs from a jar


Apple cupcakes with cream cheese frosting recipe


5 from 1 vote

Apple cupcakes with cream cheese frosting

These mini cupcakes are flavored with apple butter and cinnamon for a truly fall flavor, and topped with a cream cheese frosting that tastes like cheesecake

Course Dessert
Cuisine American
Prep Time 30 minutes
Cook Time 12 minutes
Total Time 42 minutes
Servings 54
Calories 141 kcal
Author Janice


Apple cupcake ingredients

  • 170 grams unsalted butter 3/4 cups, browned in a saucepan, then left to cool while you prepare the rest of the ingredients
  • 133 grams light brown sugar 2/3 cup
  • 287 grams all-purpose flour 2 1/4 cups
  • 1 1/2 tsp baking soda
  • 1 1/2 tsp ground cinnamon
  • 1/2 tsp salt
  • 188 mL yogurt 3/4 cup, I used fat-free plain yogurt
  • 250 mL apple butter 1 cup
  • 2 large eggs

Frosting ingredients

  • 250 grams unsalted butter room temperature
  • 200 grams icing sugar 1 3/4 cups, divided
  • 500 grams Philadelphia brand cream cheese 2 blocks, cold


  • graham cracker crumbs to garnish


To make the cupcakes

  1. Preheat the oven to 350°F. Line a 24 mini cupcake pan with mini baking cups (find them on Amazon.

  2. In a large bowl, whisk together the sugar, flour, baking soda, cinnamon, salt.
  3. In a separate bowl, whisk together the yogurt, apple butter, and eggs. Add this mixture to the bowl of dry ingredients and gently whisk to incorporate. When you just have a few dry lumps of flour left, add the melted butter, and finish mixing (with a wooden spoon, if necessary).
  4. Fill the liners 3/4 full with the batter. I recommend using a 3/4-ounce scoop (specifically this purple handled scoop on Amazon)for this.

  5. Bake the cupcakes for about 12 to 14 minutes, or until a cake tester inserted in the center comes out clean. Let cool a couple minutes in the pan before carefully transferring to a wire rack. Line the pan again, then scoop and bake again.

To make the frosting

  1. When the cupcakes are cooled, make the frosting. In the bowl of an electric mixer fitted with the paddle attachment, mix the softened butter with half the icing sugar. The mixture will be crumbly.
  2. Add all the cream cheese at once and beat it in. Then add the remaining icing sugar to sweeten/loosen up the frosting.

To finish

  1. Frost the cupcakes by piping a generous dollop on each (I used a big 20 mm round tip, but you can just cut the end of a piping bag to the desired diameter). If using, top with a sprinkling of graham cracker crumbs just before serving.

Recipe Notes

For this recipe, I used:

apple spice cupcakes with cream cheese frosting | kitchen heals soul

I do my best to bake with the finest ingredients. Stirling Creamery, a Canadian company, has provided the butter for this post.

Please note this post contains affiliate links to Amazon. As an Amazon Associate I earn from qualifying purchases. If you buy a product I recommend, I will get a small commission, and the price you have to pay will not change in any way.

apple butter, apples, apples & pears, cheese, cream cheese, fall, frosting

14 Responses to Apple cupcakes with cream cheese frosting

  1. Mallory @ Because I Like Chocolate October 30, 2013 at 7:00 pm #

    These look really good, love the pictures!

    • Janice Lawandi November 1, 2013 at 1:57 pm #

      Thanks, Mallory!

  2. Mardi Michels October 30, 2013 at 11:25 pm #

    I am also a huge fan of Charlie Brown/ Peanuts – love your adult observations 🙂 Great recipe and excellent tips for the frosting.

    • Janice Lawandi November 1, 2013 at 1:57 pm #

      Thank, Mardi! I wonder if kids these days like him as much as we do…

  3. Marlycakes October 31, 2013 at 9:25 pm #

    I like how you think! I just made a cream cheese frosting, and I creamed the butter and cream cheese together before adding the sugar. As you said, it was a loose frosting. Next time I’m going to try your method and see what happens! And also because it just looks so darned good!

    • Janice Lawandi November 1, 2013 at 1:56 pm #

      Thank you! I hope you do get to try this cream cheese frosting recipe, and when you do, let me know what you think 🙂

  4. Bunny September 4, 2019 at 11:04 pm #

    There’s another reason Cream Cheese Frosting is soupy. Whipping cream cheese destroys the emulsifiers that bind it together. Once it’s soupy, there’s no saving it. Not even agar agar, a strong gelling agent (better than gelatin) can save it. I make my regular buttercream – 1/2 # butter, 1/2 c. Sweetex, 2 T. corn syrup, 1 t. agar agar, 1 t. vanilla, and 2 c. confectioners’. When It’s all whipped, then I add 1 1/2 # soft cream cheese, and mix just barely to combine. It holds up great to frost and decorate with.

  5. Alisha Ross January 27, 2020 at 5:19 am #

    Definitely making these… wish the recipe was for fewer cupcakes so I don’t eat a dozen all by myself!!! They look amazing!

    • Janice January 27, 2020 at 6:24 pm #

      Hah! I know the feeling. I made mini cupcakes so that I could share them with lots of people. Bring them to work or share them with your neighbours 😉


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